QIIME 2

qiime2

Official repository for the QIIME 2 framework.

docs

q2-feature-classifier

QIIME 2 plugin supporting taxonomic classification

q2cli

Command line interface for QIIME 2

q2galaxy

Generate Galaxy tool descriptions automatically from QIIME 2 actions.

q2view

Rewrite q2view in svelte

q2-types

cancer-microbiome-intervention-tutorial

JupyterBook for QIIME 2 FAES January 2022 workshop

q2-longitudinal

QIIME 2 plugin for paired sample comparisons

q2-sample-classifier

QIIME 2 plugin for machine learning prediction of sample data.

q2-composition

q2-diversity

q2-quality-control

A QIIME 2 plugin for quality control of sequence and feature data

q2templates

Design template package for QIIME 2 Plugins

q2-fmt

Plugin for analysing the efficacy of fecal microbiota transplants

q2-metadata

q2-taxa

old-view.qiime2.org

Static hosting for q2view, go here for source code ->

q2-feature-table

QIIME 2 plugin supporting operations on feature tables.

sphinx-ext-qiime2

galaxy-tools

Official QIIME 2 tools for Galaxy

q2-vizard

The first choice of wizard lizards for protection and entertainment

distributions

q2-diversity-lib

q2dataflow

Automatic generator of dataflow descriptor languages for QIIME 2 plugins.

action-library-packaging

dockstore-tools

WIP: destination for tools generated by q2dataflow

q2-stats

q2view-gallery

resources

Source for QIIME 2 Resources page.