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QIIME 2 (qiime2)

QIIME 2

qiime2

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Home Page:https://qiime2.org

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QIIME 2's repositories

distributions

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q2-vizard

The first choice of wizard lizards for interactive, generalized microbiome data visualization!

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qiime2

Official repository for the QIIME 2 framework.

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q2cli

Command line interface for QIIME 2

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q2-fmt

Plugin for analysing the efficacy of fecal microbiota transplants

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action-library-packaging

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q2lint

Linter for official QIIME 2 software.

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q2-feature-table

QIIME 2 plugin supporting operations on feature tables.

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q2-dada2

QIIME 2 plugin wrapping DADA2

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q2-alignment

Support for multiple sequence alignment in QIIME 2.

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qiime2.org

qiime2.org source

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q2-diversity

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q2-types

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resources

Source for QIIME 2 Resources page.

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data302

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q2-feature-classifier

QIIME 2 plugin supporting taxonomic classification

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q2-demux

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docs

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q2view-gallery

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q2view

A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations

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cancer-microbiome-intervention-tutorial

JupyterBook for QIIME 2 FAES January 2022 workshop

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q2-diversity-lib

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sphinx-ext-qiime2

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q2galaxy

Generate Galaxy tool descriptions automatically from QIIME 2 actions.

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q2-longitudinal

QIIME 2 plugin for paired sample comparisons

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q2-stats

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vm-playbooks

Ansible playbooks for QIIME 2 environments

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galaxy-tools

Official QIIME 2 tools for Galaxy

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q2templates

Design template package for QIIME 2 Plugins

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q2-vsearch

vsearch plugin for QIIME 2

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