Giters
qiime2
/
q2-quality-filter
Quality filtering for QIIME2
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10
Issues:
27
Forks:
16
qiime2/q2-quality-filter Issues
Discuss combining actions with q2-quality-control
Updated
a year ago
Comments count
1
Remove deprecated "q_score_joined" method
Closed
4 years ago
quality filtering of paired end reads
Closed
6 years ago
Comments count
1
New Feature: filter barcodes/reads based on barcode quality scores
Updated
6 years ago
Add Citations
Closed
6 years ago
QualityFilterStatsFmt -> Metadata transformer breaks on numeric IDs
Closed
6 years ago
Explore parallelization
Updated
4 years ago
make `QualityFilterStats` viewable as `qiime2.Metadata`
Closed
7 years ago
Comments count
2
add support for SampleData[PairedEndSequencesWithQuality]
Closed
7 years ago
output semantic type of q-score is incorrect
Closed
7 years ago
add support for q-score filtering of `SampleData[JoinedSequencesWithQuality]`
Closed
7 years ago
Add the ability to reverse complement sequences before writing them
Updated
4 years ago
Comments count
11
would a `filter-fasta` method be appropriate in this plugin?
Closed
3 years ago
Comments count
1
add `description` and `short_description` to instantiation of the `Plugin` object
Closed
7 years ago
add coveralls to travis
Closed
3 years ago
Comments count
1
Sample IDs which are entirely numeric can get corrupted
Closed
7 years ago
drop q2-dummy-type from travis.yml
Closed
8 years ago
expand test suite
Closed
8 years ago
Comments count
1
set up travis
Closed
8 years ago
Comments count
1
visualize-stats suggestions
Closed
8 years ago
add bokulich nature methods citation
Closed
8 years ago
more descriptive name for the ``basic`` method?
Closed
8 years ago
have the results of this quality filter been compared to QIIME 1 split_libraries_fastq?
Closed
8 years ago
Comments count
2
parameter name suggestions
Closed
8 years ago
Comments count
1
add parameter-specific help text
Closed
8 years ago
increase minimum-quality default to 19?
Closed
8 years ago
Comments count
2
add website in plugin_setup.py
Closed
8 years ago