Giters
molgenis
/
NGS_Automated
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Watchers:
14
Issues:
19
Forks:
8
molgenis/NGS_Automated Issues
PullAndProcessGsAnalysisData.sh fails to process other batches when one batch is incomplete
Updated
a month ago
trackandtrace curlresponse in shared function
Updated
3 years ago
CopyProjectDataToPrm: when checksum has failed the wrong path to file is showed
Updated
4 years ago
Fix: Error handling for generate.sh
Updated
4 years ago
concordancecheck should accept all .vcf.gz
Updated
4 years ago
concordancecheck output link in DAT06
Updated
5 years ago
FATAL error demultiplexing.sh CURLRESPONSE
Updated
5 years ago
Change handling of sequencingStartDate in processGsRawData.sh
Closed
5 years ago
gendercheckfailed + rejectedsamples should also be added to umcg-atd.cfg
Updated
5 years ago
add samplesheet to rawdata in genomescan runs
Updated
5 years ago
when count on prm and tmp are not the same show differences
Updated
5 years ago
not possible to run startPipeline.sh with a samplesheet that contains more than 1 project
Updated
5 years ago
Bug: No error handling when something goes wrong in checking for available samplesheets.
Closed
5 years ago
Change lockfile logic.
Updated
6 years ago
get proper notification when something is wrong in demultiplexing
Updated
6 years ago
Procedure to check GS samplesheets is band aid solution
Closed
6 years ago
Comments count
1
Creation of allResultmd5sums is not an atomic operation, which may result in missing checksums.
Closed
6 years ago
Comments count
1
dataCopiedToCluster file missing
Closed
7 years ago
Comments count
2
not sending email while testing/validating pipeline
Closed
6 years ago
Comments count
1