jefferis

gphys

R package to analyse electrophysiology data acquired by Neuromatic / Igor Pro

readbitmap

R package to identify and read bitmap images

EURef2Petition

Data and code to analyses the EU 2nd referendum petition (http://petition.parliament.uk/petitions/131215)

alphashape3d

The package alphashape3d presents the implementation in R of the alpha-shape of a finite set of points in the three-dimensional space.

fmfio

R package to read the 'FlyMovieFormat' (fmf) video format

ggbeeswarm

Column scatter / beeswarm-style plots in ggplot2

scanimage

read and analyse 2 photon images from ScanImage

2018lptcin

ANTsRCore

C++ core supporting ANTsR.

brainbaser

Programmatic Access to the Brainbase Drosophila Neuroanatomy Website

BRRR

Rap adlibs in R.

catnat

CNMF_E

Constrained Nonnegative Matrix Factorization for microEndoscopic data

ColorMIP_Mask_Search

ColorMIP_Mask_Search plugin for Fiji

dendroextras

Extra functions to cut, label and colour dendrogram clusters

ercawards

fafbsegdata

Additional version data to accompany fafbseg data

frulhns

R package frulhns to accompany "A bidirectional circuit switch reroutes pheromone signals in male and female brains"

imager

R package for image processing

n5-utils

simple standalone BigDataViewer for multiple N5 (or HDF5) datasets

NeuroMatic

NeuroMatic

pyMaid

Collection of Python 3 tools to work with neuron data from CATMAID servers

remotes

Install R packages from GitHub, GitLab, Bitbucket, git, svn repositories, URLs

rhub

R-hub API client

RNeo4j

Neo4j Driver for R.

runu

R wrapper for the unu image processing tool

testlazyneuronlist

Testing lazy data load strategies for 'neuronlists'

thesis-paper

transform-helpers

Helper tools and API to apply transformations to coordinates and images

ZeroMQ-XOP

The ZeroMQ XOP enables Igor Pro to interface over the network using a ZeroMQ messaging layer and JSON as message format