gregcaporaso

dada2

Accurate sample inference from amplicon data with single nucleotide resolution

dev-docs

Developer documentation for QIIME 2

developing-with-qiime2

Developing with QIIME 2

diataxis-documentation-framework

A systematic approach to creating better documentation.

distributions

docs

Source repository for https://docs.qiime2.org

nand-to-tetris-projects

"Nand-to-tetris" project code

open-van

provenance-lib

QIIME 2 Provenance Replay Tools

q2-ancombc

qiime2 plugin for ANCOMBC

q2-assembly

QIIME 2 plugin for (meta)genome assembly.

q2-boots

q2-composition

QIIME2 plugin for compositional data analysis

q2-demux

Map sequence barcodes to sample identifiers.

q2-feature-table

QIIME 2 plugin supporting operations on feature tables.

q2-hello-amplicon

Templated plugin.

q2-hello-metagenome

q2-hello-world

Templated plugin.

q2-metadata

q2-moshpit

MOdular SHotgun metagenome Pipelines with Integrated provenance Tracking

q2-quality-control

A QIIME2 plugin for quality control of sequence and feature data

q2-sapienns

q2-taxa

q2-this-is-a-test

q2-types

Definitions of common QIIME 2 types.

q2-types-genomics

QIIME 2 types for genomics plugins.

q2cli

Command line interface for QIIME 2

qiime2

qiime2.github.io

QIIME 2 project front page

scikit-bio

Core objects, functions and statistics for working with biological data in Python.