Gerben Voshol's repositories
Unishox
Guaranteed compression for Unicode short strings
minizip
Fork of the popular zip manipulation library found in the zlib distribution.
libxlsxwriter
A C library for creating Excel XLSX files.
zip
A portable, simple zip library written in C
density
Superfast compression library
ViennaRNA
The ViennaRNA Package
sqlite3-dbx
SQLite3 with encryption support
NNPACK
Acceleration package for neural networks on multi-core CPUs
dirutil
small collection of directory related functions and a Unix style glob-pattern matcher, with added support for ** from ant (vs a path).
utf8.h
single header utf8 string functions for C and C++
t1ha
One of the fastest hash functions
libpll-2
Phylogenetic Likelihood Library 2 - experimental
dablooms
scaling, counting, bloom filter library
odfs
OneDrive Filesystem Driver for Linux
primer3
Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).
liblrhsmm
Left-to-right Hidden Semi-Markov Model implementation in C
AEGeAn
Integrated toolkit for analysis and evaluation of annotated genomes
xxHash
Extremely fast non-cryptographic hash algorithm
stb
stb single-file public domain libraries for C/C++
miniasm
Ultrafast de novo assembly for long noisy reads (though having no consensus step)
falcon
A tool to infer metagenomic sample composition
SpliceTAPyR
Splice-aware Tool for Alignment of Pyrosequencing Reads
samblaster
samblaster: a tool to mark duplicates and extract discordant and split reads from sam files.
minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
parliament2
Runs a combination of tools to generate structural variant calls on whole-genome sequencing data
degust
An interactive web-tool for RNA-seq analysis
nuklear
A single-header ANSI C gui library
Bash-Oneliner
A collection of handy Bash One-Liners and terminal tricks for data processing and Linux system maintenance.
raylib
A simple and easy-to-use library to enjoy videogames programming
libUseful
Programmers 'C' library of functions for: resizable strings, file and network access, string tokenization, pattern matching, terminal output, etc, etc