Deepak's repositories
bosc-review-of-reviews
This repository contains scripts for collating abstract reviews from EasyChair
linkml
Linked Open Data Modeling Language
biolink-model
Schema and generated objects for biolink data model and upper ontology
schema-automator
Automated assistance for the schema development lifecycle
kgx
knowledge graph exchange tools for biolink-compatible graphs
OBOFoundry.github.io
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
obo-relations
RO is an ontology of relations for use with biological ontologies
linkml-runtime
Runtime support for linkml generated models
shex-linkml
Translating ShEx into a LinkML schema (experimental)
intermine-linkml
InterMine model expressed using linkml
just-the-docs
A modern, high customizable, responsive Jekyll theme for driving Biolink Model documentation
bioregistry
đź“® An integrative registry of biological databases, ontologies, and nomenclatures.
isb2023
Assets for the International Society of Biocuration's 2023 conference
bosc_materials
Misc. documents for the Bioinformatics Open Source Conference (BOSC), https://www.open-bio.org/events/bosc/
ontology-access-kit
Ontology Access Kit
ghga-metadata-schema
Metadata schema for the German Human Genome-Phenome Archive (GHGA)
milestones-docs
Documentation and plans for service development milestones
semantic-python-overview
(subjective) overview of projects which are related both to python and semantic technologies (RDF, OWL, Reasoning, ...)
gatsby-theme-intro
Personal branding theme for developers
members
Members of the Knowledge Graphs Interest Group at the Alan Turing Institute
ontobio
python library for working with ontologies and ontology associations
trellis
A library for traversing across models defined using LinkML
linkml-model-template
Enhanced template for building and publishing LinkML based models
biolinkml
Biolink modeling language
SSSOM
Simple Standard for Sharing Ontology Mappings