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Knowledge-Graph-Hub

Knowledge-Graph-Hub

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Knowledge-Graph-Hub's repositories

kg-covid-19

An instance of KG Hub to produce a knowledge graph for COVID-19 response.

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kg-obo

A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub

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neat-ml

Network Embedding All the Things

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kg-microbe

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kg-idg

A Knowledge Graph to Illuminate the Druggable Genome

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kg-phenio

A Graph for experiments doing ML on ontologies.

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semsim

Write out file with semantic similarity of all pairs of ontology terms in a given ontology

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sri-reference-kg

Repo for generating the SRI Reference KG

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eco-kg

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kg-enp

KG-ENP: a knowledge graph for experimental natural products, based off ENPKG

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kg-example

Example repository for KG-Hub projects. Provides examples for downloading sources, transforming them, and merging them into knowledge graphs.

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knowledge-graph-hub-support

Issues, support, and discussion for KG-Hub. Covers tools, infrastructure, and graph projects.

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monarch-embedding

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universalizer

The KG-Hub Universalizer provides functions for knowledge graph cleanup and identifier normalization.

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kg-cookiecutter

A cookiecutter template for KG generation.

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knowledge-graph-hub.github.io

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multi-indexer

A utility for creating sets of templated indexes for local or remote directories.

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automate-pheno-comparisons

Jenkins-based automation of phenotype semantic similarity on PHENIO with Semsimian.

License:BSD-3-ClauseStargazers:1Issues:3Issues:6

kg-bacdive

Knowledge graph construction for BacDive data

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kg-ibd

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kg-registry

A simple registry for KGHub projects

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neat-ml-schema

A repository that contains the LinkML model for specifying graph ML pipelines

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.github

Welcome to KG-Hub

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biolink_model_category_hierarchy

Simple code to make a graph-like hierachy for biolink model categories

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kegg-kg-converter

A simple data ingested using url constructors

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kg-covid-19-dashboard

Dashboard for KG-COVID-19

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kg-envpolyreg

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kg-hub-dashboard

Dashboard visualizations for KG-Hub projects.

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NEAT-kghub-scheduler

Scheduling utility for starting NEAT jobs for KG-Hub resources.

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uniprot2s3

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