WatsonWoo

db

Scripts and databases for amplicon and metagenome

amplicon-1

Statistics and visualization for amplicon data

ampliseq

16S rRNA amplicon sequencing analysis workflow using QIIME2

awesome

Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.

Awesome-Bioinformatics

A curated list of awesome Bioinformatics libraries and software.

bayestestR

:ghost: Utilities for analyzing Bayesian models and posterior distributions

correlation

:link: Methods for Correlation Analysis

EasyAmplicon

Easy Amplicon data analysis pipeline

EasyMetagenome

Easy Metagenome Pipeline 2019 (1.0)

EasyStat

EasyStat

enrichplot

Visualization of Functional Enrichment Result

etcher

Flash OS images to SD cards & USB drives, safely and easily.

ggClusterNet

Microbial ecological network visualization clustering

ggmsa

:traffic_light: Visualizing pubication-quality multiple sequence alignment using ggplot2

ggstatsplot

Enhancing `ggplot2` plots with statistical analysis 📊🎨📣

growth_curve_fitting

Fit growth curves with a gompertz model

homebrew-bio

:beer::microscope: Bioinformatics formulae for the Homebrew package manager (macOS and Linux)

iMetaPlot

iMeta teaches you to plot

main

MicrobiomeStatPlot

Interpretation and visualization of microbiome charts

MicrobiotaProcess

modelbased

:chart_with_upwards_trend: Estimate effects, contrasts and means based on statistical models

ngs-1

Next Generation Shell (NGS)

picard

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

plotting-tree-with-data-using-ggtreeExtra

Practical-Applications-in-R-for-Psychologists

Lesson files for Practical Applications in R for Psychologists.

qiime2

Official repository for the QIIME 2 framework.

report

:scroll: :tada: Automated reporting of objects in R

Sequencing-Analysis-with-DADA2

16s rRNA data sequencing analysis using DADA2 in QIIME2 and Mothur

statsExpressions

Tidy Dataframes and Expressions with Statistical Details 📉 📜🔣✅