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Alexander Pico (AlexanderPico)

AlexanderPico

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Company:Gladstone Institutes

Location:San Francisco, CA, USA

Home Page:gladstoneinstitutes.org/scientist/pico

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Organizations
cytoscape
nrnb
wikipathways

Alexander Pico's starred repositories

gitignore

A collection of useful .gitignore templates

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cytoscape.js

Graph theory (network) library for visualisation and analysis

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TidyTuesday

My contributions to the #TidyTuesday challenge, a weekly data visualization challenge. All plots are 💯 created in R with ggplot2.

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tidytuesday

Code and plots for submissions to the #tidytuesday challenge

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cytoscape-tutorials

Collection of modular Cytoscape tutorials for online presentation using reveal.js

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just-the-class

A modern, highly customizable, responsive Jekyll template for course websites.

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Bioinformatics-Workshops

Workshops presented by the Gladstone Bioinformatics Core

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code-is-science

Scientific code needs to be open source and peer reviewed

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cptac

Python packaging for CPTAC data

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cytoscape-automation

Collection of scripts that include programmatic io and control of Cytoscape

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CEVOpen

Contentmining of Open phytochemical literature for medicinal activities

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Interactive-Enrichment-Analysis

A set of Shiny apps to provide interactive enrichment analysis and exploration of results.

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EPIC

This is the public repository for the EPIC tool.

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RaMP-DB

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rWikiPathways

R package for WikiPathways API

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pyamiimage

Image analysis is Python

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cord-19

Pathway knowledge extracted from CORD-19 dataset for the fight against COVID-19

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ERNIE

Public Repo for the ERNIE project

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GSEABenchmarking

Data and analysis vignette for the GSEA Benchmarking manuscript

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bibliometrics

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transomics2cytoscape

Get and integrate the pathways to create a 3D transomics network visualization

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open-science

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bh23

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RaMP-BackEnd

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EasycyRest

Suite of wrappers for CyREST functions in R

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cxmate

A RESTFUL network API proxy service for CX

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TumblrSlideshow

Slideshow of Tumblr photos from user dashboard

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academy

Organized training examples for new WikiPathways authors

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website-monitoring

Script and configuration for website monitoring

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imageanalysis

ContentMine Fork of the WWMM imageanalysis Package

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