Cytoscape Consortium's repositories
cytoscape.js
Graph theory (network) library for visualisation and analysis
cytoscape-tutorials
Collection of modular Cytoscape tutorials for online presentation using reveal.js
cytoscape.js-dagre
The Dagre layout for DAGs and trees for Cytoscape.js
cytoscape.js-edgehandles
Edge creation UI extension for Cytoscape.js
cytoscape.js-cxtmenu
Context menu for Cytoscape.js
cytoscape.js-cola
The Cola.js physics simulation layout for Cytoscape.js
cytoscape.js-popper
A wrapper for Popper.js that lets you position divs relative to Cytoscape elements
cytoscape.js-klay
The Klay layout algorithm for Cytoscape.js
cytoscape-automation
Collection of scripts that include programmatic io and control of Cytoscape
py4cytoscape
Python library for calling Cytoscape Automation via CyREST
cytoscape-impl
Cytoscape 3 implementation bundles.
cytoscape.js-automove
An extension for Cytoscape.js that automatically updates node positions based on specified rules
cytoscape.js-compound-drag-and-drop
Compound node drag-and-drop UI for adding and removing children
cytoscape.js-euler
Euler is a fast, high-quality force-directed (physics simulation) layout for Cytoscape.js
cytoscape.github.com
Cytoscape org web site.
cytoscape-gui-distribution
Cytoscape 3 desktop version.
js4cytoscape
JavaScript library for calling Cytoscape Automation via CyREST
cytoscape-admin-scripts
Build and maintenance scripts for Cytoscape core developers.
network-merge
Core App: Network Merge
cytoscape.js-pdf-export
PDF export extension for Cytoscape.js
cytoscape-pmcfigurebot
Query figures indexed by PubMed Central and collect metadata
network-ptm-integration
This repo tracks the work of data-driven addition of phosphorylation sites to proteins in networks (and pathways).