Shuangbin Xu's repositories
ape
analysis of phylogenetics and evolution
aplot
decorate a plot with associated information
clusterProfiler
:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters
clusterProfiler_protocol
omics data analysis using clusterProfiler ;)
enrichplot
Visualization of Functional Enrichment Result
gallery
Gallery of ggplot2 extensions
ggfun
useful functions for ggplot
gghalves
✂️ Easy half-half geoms in ggplot2
ggimage
:art: Use Images in ggplot2
ggmsa
:traffic_light: Visualizing pubication-quality multiple sequence alignment using ggplot2
ggtree
:christmas_tree:Visualization and annotation of phylogenetic trees
ggVennDiagram
A 'ggplot2' implement of Venn Diagram.
MicrobiomeProfiler
A shiny package for microbiome functional enrichment analysis
MMINP
Microbe-Metabolite INteractions-based metabolic profiles Predictor
scatterpie
:art: scatter pie plot
shadowtext
shadow text for grid and ggplot2
tidybulk
Brings bulk and pseudobulk transcriptomics to the tidyverse
tidytree
:shower:A Tidy Tool for Phylogenetic Tree Data Manipulation
treedata-book
:books: a complete reference book for treeio, tidytree and ggtree packages
treeio
:seedling:Base Classes and Functions for Phylogenetic Tree Input and Output
UltraPseR
Wappers for UltraPse in R