Center for Translational Data Science (uc-cdis)

Center for Translational Data Science

uc-cdis

Geek Repo

Center for Translational Data Science @ University of Chicago

Location:Chicago, IL

Home Page:https://ctds.uchicago.edu

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Center for Translational Data Science's repositories

cloud-automation

Automation for standing up Gen3 commons

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fence

AuthN/AuthZ OIDC Service

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data-portal

Windmill: data portal for metadata submission and query

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indexd

Index service server

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metadata-service

The Metadata Service provides API for retrieving JSON metadata of GUIDs.

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peregrine

GraphQL search API service

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sheepdog

API for herding data submissions

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cdis-data-client

data access client

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cdis-manifest

Manifests tracking service versions to release to each environment

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gen3-fuse

an S3 file system built on jacobsa/fuse that uses the workspace-token-service

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guppy

Server that supports GraphQL queries on data from Elasticsearch

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tube

ETL

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midrc_dictionary

A data dictionary for the Medical Imaging Resource Data Commons (MIDRC).

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pelican

Sower jobs for PFB export & import

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requestor

API to manage access requests

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sower

Job dispatcher for Kubernetes

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ssjdispatcher

SQS S3 Job Dispatcher

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gen3-frontend-framework

A Frontend Framework for Gen3 data portals

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cohort-middleware

Middleware to work with Atlas cohorts in Gen3

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docker-nginx

Official NGINX Dockerfiles

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gen3-code-vigil

Gen3 Testing

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manifestservice

create and read manifests from s3

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sower-jobs

Repos for storing all sower jobs

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