wgs-data

There are 0 repository under wgs-data topic.

• XWangLabTHU / cfDNApipe

  cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data

  cell-free-dnacfdnawgs-datawgbs-datasnvvirus-detectioncnv
  Language:Python 57
• Microbiome

  Chartiza / Microbiome

  scripts for microbiome analysis

  metagenomesmicrobiomewgs-data
  Language:HTML 11

• nriddiford / svParser

  Explore and filter structural variant calls from Lumpy and Delly VCF files

  structural-variationvcfwgs-datasomatic-mutationscancer-genomicsfilter-structural-variantsfilter-lumpy-expressvariantsfiltering-variants
  Language:Perl 8

• PoisonAlien / basecounts

  A tool to extract ATGC/Indel read counts at user specific loci from BAM files

  bamnucleotide-frequencybasecountsbioinformaticswgs-datasequencingreadcounts
  Language:C 5

• anasrana / spector

  R-package to analyse and quantify aberrations in DNA-sequencing data

  r-packagegenomicssequencingdna-sequencingwgs-datawhole-genome-sequencing
  Language:R 3

• CERC-Genomic-Medicine / glimpse_pipeline

  Pipeline for variant imputation in low depth sequencing data using GLIMPSE

  geneticsgenotype-imputationglimpsepipelinesequencingwgs-data
  Language:Nextflow 2

• ellisrichardj / BovTB-nf

  Nextflow script for processing WGS data

  nextflowwgs-datapipelinefastq-files
  Language:Shell 2

• nriddiford / Investigating-structural-variation-in-cancer-genomes

  My lab book for current project: Identifying structural variation in WGS data

  structural-variationcancer-genomicswgs-data
  Language:Perl 1
• AscomycotaGapAnalysis

  Rowena-h / AscomycotaGapAnalysis

  Script and data for Hill, Leitch & Gaya (2021) doi: 10.1016/j.fbr.2021.03.003

  fungiwgs-data
  Language:R 0