vcf-comparison

There are 1 repository under vcf-comparison topic.

• Illumina / hap.py

  Haplotype VCF comparison tools

  bioinformaticsgenomicsvcfvcf-comparison
  Language:C++ 402
• truvari

  ACEnglish / truvari

  Structural variant toolkit for VCFs

  structural-variationvcfbioinformaticsdata-sciencegenomicsvcf-comparisonannotation-toolsv-mergingbenchmarkingsequencing
  Language:Python 306

• dellytools / sansa

  Structural variant VCF annotation, duplicate removal and comparison

  structural-variationsv-annotationgene-annotationdellysv-mergingvcf-annotationvcf-comparisonvcf-filtering
  Language:C++ 25

• Illumina / happyR

  R tools to interact with hap.py output

  bioinformaticsrvariant-analysisvcf-comparison
  Language:R 15

• LindoNkambule / VCFCompare

  VCFCompare for concordance between two callsets

  bioinformaticsvcfvcf-comparison
  Language:Python 1

• pmadanecki / htdp

  High-throughput Tabular Data Processor (HTDP)

  geneticsngsmicroarraycghvcfvcf-converterconverterjavabioinformatics-analysisbioinformaticsvariant-call-formatdata-analysisnext-generation-sequencingvcf-filteringvcf-filesvcf-datavcf-comparisoncomparative-genomic-hybridizationfiltering
  1