sra-data

There are 0 repository under sra-data topic.

pepkit / geofetch
Builds a PEP from SRA or GEO accessions
download-manager sra geo sra-data metadata
Language:Python 42
cparsania / FungiExpresZ
An R-shiny package to analyse and visualise fungal gene expression data
rpackage shinyapp datavisualization geneexpression fungi sra-data visualizations visualization
Language:R 9
yodeng / srautils
fast utils for fetch and dump NCBI SRA archive raw data
fastq-dump ncbi-sra sra-data sra-toolkit sratoolkit
Language:Python 1
hoonjeseong / get_sra
Get SRA data from Bioproject
sra-data
Language:Python 0
JotaKas / hmdb_scripts
HumanMetagenomeDB: a public repository of curated and standardized metadata for human metagenomes
metagenomes human-metagenome sra-data mg-rast-data metadata
Language:Python 0
Louise-la / RNA_seq_alignment_pipeline
RNA-Seq Pipeline for processing paired-end FASTQ transcripts generated from Illumina sequencing. The pipeline trims adapter sequences, aligns transcripts to a specified region of interest on the reference genome, and facilitates downstream analysis.
bioinformatics computational-biology data-processing fastq gene-expression illumina-sequencing next-generation-sequencing python rna-seq sra-data transcriptomics
Language:Python 0

pepkit / geofetch