spaced-seeds

There are 0 repository under spaced-seeds topic.

• CMU-SAFARI / BLEND

  BLEND is a mechanism that can efficiently find fuzzy seed matches between sequences to significantly improve the performance and accuracy while reducing the memory space usage of two important applications: 1) finding overlapping reads and 2) read mapping. Described by Firtina et al. (published in NARGAB https://doi.org/10.1093/nargab/lqad004)

  bioinformaticsblendde-novo-assemblygenome-analysisgenome-assemblyminimizersread-mappingstrobemersfuzzy-seedsread-overlappingseed-matchingspaced-seeds
  Language:C 34