prophage-prediction

There are 0 repository under prophage-prediction topic.

• mtisza1 / Cenote-Taker2

  Cenote-Taker2: Discover and Annotate Divergent Viral Contigs (Please use Cenote-Taker 3 instead)

  annotationcenote-taker2cenote-unlimited-breadsticksdiscoverygenbankhallmarkhhblitshhsearchmetagenomesprophageprophage-predictionviromevirusvirus-discoveryvirus-evolutionvirus-sequences
  Language:Shell 57

• WangLab-SCSIO / Prophage_Tracer

  Prophage Tracer: precisely tracing prophages in prokaryotic genomes using overlapping split-read alignment

  bioinformaticsgenomicsngssequencingprophageprophage-prediction
  Language:Shell 22

• mtisza1 / Cenote_Unlimited_Breadsticks

  DEPRECATED: Discover divergent virus sequences, prune flanking cellular sequences, make basic report

  unlimited-breadsticksviruscontigsdiscoverypredictionprophagephagehidden-markov-modelvirus-discoveryprophage-prediction
  Language:Shell 6
• JAMIRA

  enteromar / JAMIRA

  a reproducible and scalable workflow for prokaryote genomic data analysis designed for the genera Enterococcus spp.

  genomic-islands-predictionplasmid-predictionjamira-workflowprophage-predictionvirulence-factors
  Language:Python 1