phylogenomic

There are 0 repository under phylogenomic topic.

• etetoolkit / ete

  Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.

  phylogeneticsphylogenomicpythontree-structuretreeviewvisualization
  Language:Python 764

• ODiogoSilva / TriFusion

  Streamlining phylogenomic data gathering, processing and visualization

  geneticsguikivyorthologuesphylogeneticsphylogenomicpythonvisualization
  Language:Python 87

• AusARG / pipesnake

  ausarg/pipesnake is a bioinformatics best-practice analysis pipeline for phylogenomic reconstruction starting from short-read 'second-generation' sequencing data.

  phylogenomic
  Language:Nextflow 5

• V-Z / sondovac

  Sondovač is a script to create orthologous low-copy nuclear probes from transcriptome and genome skim data for target enrichment. For latest version check "releases".

  sciencephylogeneticsngs-pipelinengs-analysisngsgeneticsmolecular-biologyphylogenomics-pipelinephylogenomicspipelinehybseq-dataorthologuestranscriptomedata-analysisdata-sciencephylogenomictaxonomic-classificationbioinformaticsbioinformatics-pipelinebioinformatics-analysis
  Language:TeX 5

• tetsufmbio / hypertriplets

  A phylogenomics tool that makes a supetree based on triplets analysis. It takes as input several gene trees in Newick format.

  supertreephylogenomic
  Language:Perl 0