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ETE Toolkit (etetoolkit)

ETE Toolkit

etetoolkit

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A Python framework for the analysis and visualization of trees.

Home Page:http://etetoolkit.org

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ETE Toolkit's repositories

ete

Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.

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cookbook

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course

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treematcher

Search flexible patterns within tree structures using regular expression like syntax.

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pmodeltest

Python implementation of modeltest/prottest supporting proteins and nucleotides (can be run in parallel).

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ext_apps

A compilation of external software used by ETE

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webplugin

Experiments for a new webplugin module (examples for phylotastic.org project )

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ete4_apps

command line applications based on ete4

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ete_toolchain

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etetoolkit_GSoC

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GSoC

OBF Google Summer of Code

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logicali

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ete-data

Data files to use with the ETE Toolkit

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