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EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource
qtop (pronounced queue-top) is a tool written in order to monitor the state of Queueing Systems, along with related information relevant on HPC & grid clusters. At present it supports **PBS, SGE & OAR** families. There is a historic reference for the prior shell version of the tool, at former CERN source:
An interface for managing computational experiments with many independent variables.
Tracknodes keeps a history of node state and comment changes. It allows system administrators of HPC systems to determine when nodes were down and discover trends such as recurring issues. Supports Torque, PBSpro and SLURM.
'PBS Pro' implementation of Ensembl Hive Meadow interface
Flexlm parser for PBS Pro to integrate license aware scheduling
An Open Source Collection of Program for Interactive Submission of Computational Chemistry Calculation on TAIWANIA Cluster, Taiwan
Creating and running Nextflow pipelines on Clemson's Palmetto cluster
:star: :penguin: :new: GPU Sku usage for Ubuntu 16.04-LTS and CentOS 7.4 , Standard Open Source Scheduler Deployments Torque, SLURM, PBSPro for HPC Skus for CentOS 7.4-HPC with OMS. This is presently on the GAed CentOS-HPC A9/H16R/H16MR and GPU NC6/NC12/NC24 . Latest Docker CE and nvidia-docker present in all. Updating for DIGITS for 2.0 on nvidia-runtime
Terraform module to deploy PBS Pro on Oracle Cloud Infrastructure (OCI)
Nodejs module to interact with a PBS Pro™ Server
A library to access different kinds of cluster backends
Uniform Recognizer machine learning training pipeline and models.
An example implementation for the Cromwell workflow management system on PBS Pro