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R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling
A repository to convert SDRF proteomics files into pipelines config files
Converter functions for the MSstats package
Simulation tool for optimal design of high-dimensional MS-based proteomics experiment
R-based package for detecting differencially abundant post translational modifications (PTM) in shotgun mass spectrometry-bsed proteomic experiments with tandem mass tag (TMT) labeling
Converter from Census TMT output file to the input of MSstatsTMT