methylation-arrays

There are 1 repository under methylation-arrays topic.

metamaden / methyPre
Methylation array preprocessing.
preprocessing qc methylation-arrays hg19 minfi bioconductor illumina-bead-chip hm450k sva combat batch-correction cpg normalization swan-normalize illumina-normalize
Language:R 5
markgene / maxprobes
Methylation Array Cross-Reactive Probes
methylation methylation-microarrays methylation-arrays
Language:R 3
stjude-biohackathon / MethylMiner
A methylation array analysis pipeline tailored for discovering rare methylation events with interactive data visualization
bioinformatics-pipeline methylation-analysis methylation-arrays
Language:Python 2
IlluminaMouseMethylationanno.12.v1.mm10
chiaraherzog / IlluminaMouseMethylationanno.12.v1.mm10
This package provides Illumina Mouse Methylation Array Annotation (12.v1, Genome Build mm10) compatible with minfi.
bioinformatics illumina-bead-chip methylation-analysis methylation-annotation methylation-arrays minfi
Language:R 1
metamaden / InfiniumPurifyR
Estimate tumor enrichment from methylation array data.
methylation-arrays tumor-purity preprocessing qc illumina-bead-chip hm450k
Language:R