l1000

There are 0 repository under l1000 topic.

• dhimmel / lincs

  Library of Integrated Cellular Signatures L1000

  gene-expressionl1000lincsrephetio
  Language:Jupyter Notebook 25

• njpipeorgan / L1000-bayesian

  L1000 peak deconvolution based on Bayesian analysis

  bioinformatics-algorithmsbioinformatics-databasesl1000lincs
  Language:Mathematica 24
• drug-disease-profile-matching

  krassowski / drug-disease-profile-matching

  Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap

  drug-discoverydrug-repurposingstratificationmulti-omicslincsgctl1000
  Language:Jupyter Notebook 16

• FangpingWan / EXP2SL

  EXP2SL: a Machine Learning Framework for Cell-Line Specific Synthetic Lethality Prediction

  deep-learningl1000machine-learningsynthetic-lethal
  Language:Python 7

• nuno-agostinho / cTRAP

  Identification of candidate causal perturbations from differential gene expression data

  bioconductorl1000gene-expressionbioinformaticsrr-packagecmap
  Language:R 5

• AIMedLab / DeepCE

  Code and Datasets for the paper "A deep learning framework for high-throughput mechanism-driven phenotype compound screening and its application to COVID-19 drug repurposing", published on Nature Machine Intelligence in 2021.

  chemical-induced-gene-expressioncovid-19drug-repurposinggraph-neural-networkl1000multi-head-attentionphenotypic-drug-discovery
  Language:Python 3

• AIMedLab / CIGER

  Code and Datasets for the paper "Chemical-induced gene expression ranking and its application to pancreatic cancer drug repurposing", published on Patterns in 2022.

  chemical-induced-gene-expressiondeep-learningdrug-repurposinggraph-neural-networkl1000learning-to-rank
  Language:Python 2

• data-intuitive / LuciusWeb

  The web frontend for Lucius

  cyclejsl1000reactiveweb-frontendwebapp
  Language:JavaScript 1