hifi-read

There are 0 repository under hifi-read topic.

chhylp123 / hifiasm
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
bioinformatics denovo-assembly genomics hifi-read pacbio
Language:C++ 490
Mangul-Lab-USC / review-technology-dictates-algorithms
A systematic survey of algorithmic foundations and methodologies across 107 alignment methods (1988-2021), for both short and long reads. We provide a rigorous experimental evaluation of 11 read aligners to demonstrate the effect of these underlying algorithms on speed and efficiency of read alignment. Described by Alser et al. at https://arxiv.org/abs/2003.00110.
read-alignments needleman-wunsch smith-waterman heuristics read-mapping sequence-alignment hts nanopore-sequencing illumina-sequencing pacbio-sequencing hifi-read genome-analysis
Language:Jupyter Notebook 6

chhylp123 / hifiasm