fragmentomics

There are 0 repository under fragmentomics topic.

Isy89 / LBF
bioinformatics cfdna cli feature-extraction liquid-biopsy plugin-system python3 transcription-factor-binding-site transcription-factors tui transcription-start-site differential-transcription-factors-activity biomarker-discovery fragmentomics
Language:Python 6
amatov / FragmentomicsSubclinicalDisease
breast-cancer gastric-cancer lung-cancer ovarian-cancer pancreatic-cancer bile-duct-cancer duodenal-cancer colon-adenoma colon-cancer deep-learning rectal-adenoma rectal-cancer early-detection sub-clinical-disease fragmentation-patterns fragmentomics dna-fragment-length whole-genome-sequencing identify-disease-stage early-detection-of-disease
Language:R
amatov / TumorAgnosticUMI
colon-cancer rectal-cancer colon-adenoma detect-recurrence predict-relapse rectal-adenoma scikit-learn ultra-deep-sequencing tumor-agnostic-approach clinical-trials blacklisting-filter error-rates lasso-regression limit-of-detection unique-molecular-identifiers mutation-score fragmentomics dna-fragmentation-patterns detection-error-rates sensitivity-specificity
Language:R

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