expression-profiles

There are 0 repository under expression-profiles topic.

drostlab / myTAI
Evolutionary Transcriptomics with R
evolutionary-transcriptomics r transcriptome evolution evo-devo studies-transcriptomes biological-processes gene-sets mytai gene-expression conservation expression-profiles
Language:R 36
kullrich / orthomap
orthomap is a python package to extract orthologous maps (in other words the evolutionary age of a given orthologous group) from OrthoFinder/eggNOG results. Orthomap results (gene ages per orthogroup) can be further used to calculate weigthed expression data (transcriptome evolutionary index) from scRNA sequencing objects.
bioinformatics evolution expression-profiles gene-expression gene-expression-profiles orthofinder orthomap phylostratigraphy python scanpy scrna-seq-analysis tai transcriptome
Language:Python 6
kullrich / scTEI
add any phylogenetically based transcriptome evolutionary index (TEI) to single-cell data objects
bioinformatics evolution expression-profiles gene-expression gene-expression-profiles orthofinder phylostratigraphy scrna-seq-analysis sctei seurat seurat-objects
Language:HTML 2

drostlab / myTAI