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Set of high throughput sequencing analysis scripts to quickly generate and queue jobs on SLURM-based HPC clusters.
Counts barcodes within next generation sequencing data. DNA encoded libraries (DEL), CRISPR, and barcode-seq
Counts barcodes within next generation sequencing data. DNA encoded libraries (DEL), CRISPR, and barcode-seq
Pipeline for CRISPR-Cas9 screen analysis
CRISPRAnalyzeR: interactive analysis, annotation and documentation of pooled CRISPR screens. Implemented as R shiny app.