circular-dna

There are 0 repository under circular-dna topic.

• iprada / Circle-Map

  A method for circular DNA detection based on probabilistic mapping of ultrashort reads

  eccdnaecdnagenotypingngsstructural-variationcircular-dnacircrnacircrna-predictioncircrnasmicrodna
  Language:Python 60

• pk7zuva / Circle_finder

  Micro DNA identification

  circular-dnagenome-duplicationstructural-variationsmicrohomologymicrodna
  Language:Shell 21
• ECCsplorer

  crimBubble / ECCsplorer

  The ECCsplorer is a bioinformatics pipeline for the automated detection of extrachromosomal circular DNA (eccDNA) from paired-end read data of amplified circular DNA.

  eccdnacircular-dna
  Language:Python 18

• pierrj / ecc_caller

  ecc_caller is a pipeline designed to take Illumina NovaSeq paired end sequencing reads generated from isolated circular DNA and call eccDNA forming regions.

  eccdnacircular-dnaecdna
  Language:Python 6