tlambert03

FPbase

The Fluorescent Protein Database

ome-types

native Python dataclasses for the OME data model

nd2

Full-featured nd2 (Nikon NIS Elements) file reader for python. Outputs to numpy, dask, and xarray. Exhaustive metadata extraction

napari-omero

Browse your OMERO database from within napari.

LLSpy

Lattice light-sheet post-processing utility.

napari-ndtiffs

A napari plugin to load & deskew folders of lattice light sheet TIFFs

microsim

mrc

Read and write .mrc and .dv (deltavision) image file format.

pyrepo-cookiecutter

personal repo bootstrap

napari

a fast, interactive, multi-dimensional image viewer for python

pamba

napari-dv

Deltavision/MRC file reader for napari

microvis

pydantic-compat

Compatibility layer for pydantic v1/v2

pymmcore-plus

A convenience layer on pymmcore (micro-manager) providing improved pythonic experience and event management

dropbox-download-action

magicgui

build GUIs from python functions, using magic.

napari-micromanager

GUI interface between napari and micromanager powered by pymmcore-plus.

eda_plugin

Plugin for event-driven acquisition to be used with Micro-Manager

motile

Multi-Object Tracker using Integer Linear Equations

napari-feedstock

A conda-smithy repository for napari.

napari-spacemouse

nictool

ome-types-feedstock

A conda-smithy repository for ome-types.

psygnal

Python callback/event system. Modeled after Qt Signals & Slots (but independent of Qt)

pydantic-ome-ngff

Pydantic models for OME-NGFF

pymmcore-widgets

A set of Qt-based widgets onto the pymmcore-plus model

scikit-image

Image processing in Python

staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

useq-schema

An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.