Matt McCormick's repositories
docker-opengl-mesa
Docker image for running X GUI apps with OpenGL hardware acceleration via the mesa drivers.
shardedstore
Provides a sharded Zarr store
ANTs
Advanced Normalization Tools (ANTs)
CastXML-python-distributions
Python wheels to distribute CastXML, a C-family abstract syntax tree XML output tool.
colorcet
A set of useful perceptually uniform colormaps for plotting scientific data
datalad
Keep code, data, containers under control with git and git-annex
datalad-action
development repository for datalad action
datatree
WIP implementation of a tree-like hierarchical data structure for xarray.
imjoy-jupyterlab-extension
JupyterLab Extension for ImJoy
ipfsspec
readonly python fsspec implementation for IPFS
ipldstore
zarr backend store using IPLD datastructures
itk-torch-transform-bridge
Bringing deep registration into the clinical world
ITKClangFormatLinterAction
GitHub Action to check for consistency with ITK's Coding Style
ITKGenericLabelInterpolator
The basic idea of this generic interpolator for label images is to interpolate each label with an ordinary image interpolator, and return the label with the highest value. This is the idea used by the itk::LabelImageGaussianInterpolateImageFunction interpolator. Unfortunately, this class is currently limited to Gaussian interpolation. Using generic programming, our proposed interpolator extends this idea to any image interpolator. Combined with linear interpolation, this results in similar or better accuracy and much improved computation speeds on a test image.
jupyterlite
Wasm powered Jupyter running in the browser 💡
ome-zarr-py
Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
py3dviz-scipy22-1
Tutorial material for the Pythonic 3D visualization at SciPy 2022
runner-images
GitHub Actions runner images
spectrum-web-components
Spectrum Web Components
tifffile
Read and write TIFF files. Forked from https://pypi.org/project/tifffile
wasmer-python
🐍🕸 WebAssembly runtime for Python
xstate
State machines and statecharts for the modern web.
zarr-python
An implementation of chunked, compressed, N-dimensional arrays for Python.
zeps
Zarr Enhancement Proposals