The Scientific Computing and Imaging Institute

The Scientific Computing and Imaging Institute's repositories

SCIRun

SCIRun is a Problem Solving Environment, for modeling, simulation and visualization of scientific problems. This is version 5, the upgraded version of SCIRun v4.

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Seg3D

Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the University of Utah Scientific Computing and Imaging (SCI) Institute.

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ShapeWorks

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ImageVis3D

An out-of-core volumetric rendering application.

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Cleaver

A MultiMaterial Tetrahedral Meshing Library and Application

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fluorender

FluoRender is an interactive rendering tool for confocal microscopy data visualization.

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Tuvok

GPU-accelerated, out-of-core volume rendering library.

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ShapeWorksStudio

Shapeworks Studio is a free shape analysis tool.

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DiffractionClassification

An open service to classify diffraction patterns

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BrainStimulator

BrainStimulator is a software package to simulate (transcranial) brain stimulation and is implemented in the scientific problem solving environment that SCIRun offers (version > 5.0).

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