Matt McCormick's repositories
screen-cpu-mem
CPU and memory usage monitoring programs for GNU Screen
docker-opengl-mesa
Docker image for running X GUI apps with OpenGL hardware acceleration via the mesa drivers.
shardedstore
Provides a sharded Zarr store
ITKMontage
Reconstruction of 3D volumetric dataset from a collection of 2D slices
CastXML-python-distributions
Python wheels to distribute CastXML, a C-family abstract syntax tree XML output tool.
colorcet
A set of useful perceptually uniform colormaps for plotting scientific data
dask-image
Distributed image processing
datalad
Keep code, data, containers under control with git and git-annex
datalad-action
development repository for datalad action
datatree
WIP implementation of a tree-like hierarchical data structure for xarray.
HASI
High-throughput Application for Skeletal Imaging
ipldstore
zarr backend store using IPLD datastructures
itk-viewer-color-maps
Color maps for itk-viewer
itk-viewer-material-ui
A Material UI interface for itk-viewer
itk-viewer-transfer-function-editor
Interface to interactively edit opacity transfer functions, etc
ITKBoneMorphometry
ITK filters that quantify bone morphometry
ITKGenericLabelInterpolator
The basic idea of this generic interpolator for label images is to interpolate each label with an ordinary image interpolator, and return the label with the highest value. This is the idea used by the itk::LabelImageGaussianInterpolateImageFunction interpolator. Unfortunately, this class is currently limited to Gaussian interpolation. Using generic programming, our proposed interpolator extends this idea to any image interpolator. Combined with linear interpolation, this results in similar or better accuracy and much improved computation speeds on a test image.
ITKRANSAC
Random Sample Consensus (RANSAC) Algorithm for PointSet registration
ITKThickness3D
An ITK module to compute 3D thickness
ome-zarr-py
Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
runner-images
GitHub Actions runner images
spectrum-web-components
Spectrum Web Components
w3ui
👩🎤 Headless, type-safe, UI components for the next generation Web3.Storage APIs.
wasmer-python
🐍🕸 WebAssembly runtime for Python
xstate
State machines and statecharts for the modern web.
zarr-python
An implementation of chunked, compressed, N-dimensional arrays for Python.