pblaney / mgp1000

Nextflow bioinformatics pipeline for large-scale analysis of Multiple Myeloma genomes

Home Page:https://pblaney.github.io/mgp1000-docs/

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Myeloma Genome Pipeline 1000 MGP1000 logo

Comprehensive bioinformatics pipeline for the large-scale collaborative analysis of Multiple Myeloma genomes in an effort to delineate the broad spectrum of somatic events

Pipeline Documentation

๐ŸŽ๏ธ ๐Ÿ ๐Ÿ† Let's get started ...

Citation

Hopefully soon....

Contact

If there are any further questions, suggestions for improvement, or wishes for collaboration please feel free to email: patrick.blaney@nyulangone.org

Acknowledgements

Author, maintainer

Patrick Blaney, MS - NYU Langone Health, Multiple Myeloma Research Program & Applied Bioinformatics Laboratories

Senior leaders

Gareth Morgan, MD, PhD - NYU Langone Health, Multiple Myeloma Research Program

Francesco Maura, MD - University of Miami, Sylvester Comprehensive Cancer Center

Kylee Maclachlan, MBBCh, PhD - Memorial Sloan Kettering Cancer Center, Myeloma Service

Brian Walker, PhD - Indiana University School of Medicine, Melvin and Bren Simon Comprehensive Cancer Center

Niels Weinhold, PhD - University Hospital Heidelberg, Myeloma Research Group

Beta testers

Dylan Gagler, MS - NYU Langone Health, Multiple Myeloma Research Program & Applied Bioinformatics Laboratories

Parvathi Sudha, MS - Indiana University School of Medicine, Melvin and Bren Simon Comprehensive Cancer Center

Travis Johnson, PhD, MSPH - Indiana University School of Medicine, Melvin and Bren Simon Comprehensive Cancer Center

Michael Durante, MD, PhD - University of Miami, Sylvester Comprehensive Cancer Center

Bachisio Ziccheddu, PhD - University of Miami, Sylvester Comprehensive Cancer Center

David Coffey, MD - University of Miami, Sylvester Comprehensive Cancer Center

Alexandra Poos, PhD - University Hospital Heidelberg, Myeloma Research Group

Implementation advice

Nicolas Robine, PhD - New York Genome Center, Computational Biology Lab

Timothy Chu, MS - New York Genome Center, Computational Biology Lab

About

Nextflow bioinformatics pipeline for large-scale analysis of Multiple Myeloma genomes

https://pblaney.github.io/mgp1000-docs/

License:MIT License


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Language:Nextflow 62.3%Language:R 28.7%Language:Shell 5.0%Language:Python 2.5%Language:Makefile 0.8%Language:Perl 0.7%Language:JavaScript 0.0%