nvictus

pqdict

A Pythonic indexed priority queue

svgpath2mpl

SVG path parser for matplotlib

pybbi

Python bindings to UCSC BigWig and BigBed library

lavaburst

Chromatin domains bursting with flavor

coltab

Columnar tables

bow

CLI for Parquet <-> CSV interconversion

bioframe-lite

Experiment with new bioframe join APIs

CoolBox

Jupyter notebook based genomic data visualization toolkit.

pandas-jupyter-paginate

Jupyter widgets-based paginator for pandas dataframes

bigtools

bioconda-recipes

Conda recipes for the bioconda channel.

bioframe

Pandas utilities for tab-delimited and other genomic data files

clodius

Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.

cooler

A cool place to store your Hi-C

cooltools

The tools for your .cool's

datashader

Quickly and accurately render even the largest data.

eigen-tour

gcal2when2meet

A bookmarklet to import your Google Calendar events into a when2meet

higlass-manage

A utility script to manage local docker instances of HiGlass

higlass-python

Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer

kerchunk

Cloud-friendly access to archival data

looplib

A library to analyse the structure of 1d loops and simulate loop extrusion by loop extruding factors.

mpl-third-party

Webpage

oxbow

Read specialized NGS formats as data frames in R, Python, and more.

scipy_proceedings

Tools used to generate the SciPy conference proceedings

servir

simple-httpfs

test_nbdev

umap

Uniform Manifold Approximation and Projection

zarr-python

An implementation of chunked, compressed, N-dimensional arrays for Python.