luizirber

Luiz Irber's repositories

phd

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ukhs

Universal K-mer Hitting Set library in Rust

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2020-11-02-greyhound

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2020-cami

Preparing sourmash for CAMI 2 evaluations

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decoct

The essence of sourmash. An experimental CLI with a subset of the sourmash features, mainly used to drive development of features in the core library.

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wort-dnd

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2020-08-14-debug-sbt

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2020-09-06-jct

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2020-10-02-vdb

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2020-10-21-sunburst

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2021-01-27-olga-remove-protein

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2021-02-26-text-minhash

An experiment using sourmash for working with natural language (instead of genomic k-mers).

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2021-04-17-angular-bound

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BitMagic

BitMagic Library

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dammit

just annotate it, dammit!

NOASSERTION000

gb_read

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kmers

A bit-packed k-mer representation (and relevant utilities) for rust

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mach-nix

Create highly reproducible python environments

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needletail

Fast FASTX parsing and k-mer methods in Rust

MIT000

piz-rs

Parallelized zip archive reading

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postmeritocracy

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rms-open-letter.github.io

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rob-p

CC-BY-SA-4.0000

rust-bio

This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

Language:RustMIT020