kcleal

gw

Genome browser and variant annotation

dysgu

Toolkit for calling structural variants using short or long reads

pywfa

Python wrapper for wavefront alignment using WFA2-lib

SV_Benchmark_CMRG

Structural variant benchmark of challenging medically relevant genes

svbench

Benchmark structural variant calls against a reference set

SV_benchmark_PacBio_HiFi

Structural variant benchmark using PacBio HiFi reads

fnfi

fnfi is a set of tools for aiding split-read alignment and identify structural variants

kmerhash

Convert python string to hashed kmers and back again

RemoveCramTags

Quickly remove tag(s) from SAM/BAM/CRAM files

zights

htslib for the zig build system

BadreadAmplicon

a long read simulator that can imitate many types of read problems

bioconda-recipes

Conda recipes for the bioconda channel.

dodi

homebrew-core

🍻 Default formulae for the missing package manager for macOS (or Linux)

InSilicoSeqSplit

:rocket: A sequencing simulator

physlr

:chains: Construct a Physical Map from Linked Reads

homebrew-gw

Feedstock for homebrew tap of GW

MINGW-packages

Package scripts for MinGW-w64 targets to build under MSYS2.

rare-disease-wf

(WIP) best-practices workflow for rare disease

ref_genomes

A collection of reference genomes

skia_build_arm64

Pre-compiled binaries for Apple M1

skia_context_debug

Debug skia gpu context

sortedintersect

Fast intersection of sorted reference intervals and sorted queries

termux-packages

A package build system for Termux.

WFA2-lib

WFA2-lib: Wavefront alignment algorithm library v2