Jose Posada's repositories
oop_202201
IST 2110 Undergrad Course on Object Oriented Programming in Python 2022-01
QuickUMLS
System for Medical Concept Extraction
BEEP
Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system
biomedical
Tools for curating biomedical training data for large-scale language modeling
DatabaseConnector
An R package for connecting to databases using JDBC.
FeatureSelectionComparison
PatientLevelPrediction methods research investigating different feature selection approaches for simplifying models
GENRE
Autoregressive Entity Retrieval
hugo
The world’s fastest framework for building websites.
KILT
Library for Knowledge Intensive Language Tasks
medspacy
Library for clinical NLP with spaCy.
Phenotype_Data_Acquisition
The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream
python-package-template
A template repo for Python packages
pytorch_ehr
source codes based on PyTorch to analyze EHR
umls_downloader
Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically