jdposada's repositories
BQJdbcConnectionStringR
Helper function to build a connection string to use the JDBC BigQuery driver in R in conjunction with OHDSI DatabaseConnector package
cnn-text-classification-pytorch
CNNs for Sentence Classification in PyTorch
CohortDiagnostics
[Under development] An R package for performing various cohort diagnostics.
CommonDataModel
Definition and DDLs for the OMOP Common Data Model (CDM)
cookiecutter-data-science
A logical, reasonably standardized, but flexible project structure for doing and sharing data science work.
Covid19CharacterizationCharybdis
Characterizing Health Associated Risks, and Your Baseline Disease In SARS-COV-2 (CHARYBDIS) - a study to describe the baseline demographic, clinical characteristics, treatments and outcomes of interest among individuals tested for SARS-CoV-2 and/or diagnosed with COVID-19 compared to Influenza patients from 2017-2018
Covid19VaccinePrediction
A methodology study into the stability of prediction models across target cohort and outcome phenotypes
DataQualityDashboard
A tool to help improve data quality standards in observational data science.
Deedy-Resume
A one page , two asymmetric column resume template in XeTeX that caters to an undergraduate Computer Science student
Med-BERT
Med-BERT, contextualized embedding model for structured EHR data
mimic-omop
Mapping the MIMIC-III database to the OMOP schema
PerioperativePrediction
A template for new study repositories
psets
Consolidate all problem sets into one repo
recitations
Here we will post recitation materials.