Hans Johnson's repositories
Artichoke
CMake module allowing to easily create a build system on top of ExternalProjects
HyperDenseNet
This repository contains the code of HyperDenseNet, a hyper-densely connected CNN to segment medical images in multi-modal image scenarios.
LiviaNET
This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study"
circuitjs1
Electronic Circuit Simulator in the Browser
UMBC_HW3
UMBC_HW3
plot
Header-only terminal plotting library for C++
ismrmrd
ISMRM Raw Data Format
drjava
Branches for integration and releases
example
This an example app that can serve as a template.
lapack
LAPACK development repository
bart
Berkeley Advanced Reconstruction Toolbox: Image reconstruction for Magnetic Resonance Imaging
PowerGrid
GPU accelerated non-Cartesian magnetic resonance imaging reconstruction toolkit
gadgetron
Gadgetron - Medical Image Reconstruction Framework
gerard-miccai2016
Miccai 2016 publication folder
conda-recipes
build and test recipes for conda
gym
A toolkit for developing and comparing reinforcement learning algorithms.
xcodelegacy
Legacy components for XCode 4/5/6/7 (deprecated compilers and Mac OS X SDKs)
cnpy
library to read/write .npy and .npz files in C/C++
MICCAI_AlphaShapes
A demo for miccai alpha shapes
intel-tbb
Open Source Intel Thread Building Blocks fork with support for POWER architecture.
Kalman-and-Bayesian-Filters-in-Python
Kalman Filter book using Jupyter Notebook. Focuses on building intuition and experience, not formal proofs. Includes Kalman filters,extended Kalman filters, unscented Kalman filters, particle filters, and more. All exercises include solutions.
nibabel
Python package to access a cacophony of neuro-imaging file formats
dipy
Diffusion MR Imaging in Python
XEParallelProg
SourceCode for teaching Paralell programming.
LabelErodeDilate
Erode and dilate operations on label images