galaxy-genome-annotation / galaxy-circos-tool

DEPRECATED: Merged into https://github.com/galaxyproject/tools-iuc/

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DEPRECATED

This repository has been deprecated, all code is part of tools-iuc now.

Galaxy Circos Tool

Features

  • [x] Ideograms
    • [x] Can configure most aspects of these. More features on demand
  • [x] 2d Data sources
    • [x] Histograms
      • [x] Stacked histograms
      • [x] gff3 scores
      • [x] wig files
      • [x] bed
      • [x] Rules
        • [x] Complex colouring rules
    • [x] Heatmaps
      • [ ] Bugs here.
    • [x] Tiles
    • [x] Scatter Plots
    • [x] Line Plots
  • [x] Links
  • [x] Axes
  • [x] Backgrounds
  • [x] Highlights
    • [ ] Wedge
  • [x] Test cases
  • [ ] Grids?
  • [ ] Fine grained Z-depth control

About

DEPRECATED: Merged into https://github.com/galaxyproject/tools-iuc/

License:GNU General Public License v3.0


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Language:Python 100.0%