gabefoley

Gabe Foley's repositories

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Calculate the parsimony cost of having an ancestral residue implied by an alignment and tree

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Open source code for AlphaFold.

Language:PythonApache-2.0000

Calculate the level of agreement between two ancestral reconstructions from differing tools

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Tool for performing phylogenetic and ancestral studies on multi-subunit proteins

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Website for cleaning FASTA headers and newick strings

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Hugo website

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🧬 gget enables efficient querying of genomic reference databases to support the analysis of sequencing data.

Language:PythonBSD-2-Clause000

Generate ITOL annotation files from annotated dataframes

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Example code for running Partial Order Viterbi alignment method

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Process the trees and alignments available in the TreeFam database

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:page_with_curl: Use showdown as a vue component

Language:TypeScriptMIT000