Andrey Fedorov's repositories
SlicerIDCBrowser
A 3D Slicer extension to support access to the content of NCI Imaging Data Commons
idc-index-data
Python package providing the index to query and download data hosted by the NCI Imaging Data Commons
medical-imaging-datasets
A list of Medical imaging datasets.
ChangeTrackerPy
Migration of ChangeTracker module from C++/Tcl Slicer3 to C++?/Python Slicer4
MITK
The Medical Imaging Interaction Toolkit.
mhub-models
Stores the MHub models dockerfiles and scripts.
TotalSegmentator
Tool for robust segmentation of >100 important anatomical structures in CT images
QuantitativeReporting
3D Slicer module for creating template-based annotation+markup imaging reports.
prostate_mri_us_biopsy_dcm_conversion
Examples for converting prostate MRI-US-Biopsy STL prostate and lesion surfaces to DICOM SEG and DICOM STL.
SlicerTotalSegmentator
Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model
ExtensionsIndex
Slicer extensions index
IDC-WebApp
Web Application front end for IDC
plastimatch_builds
Builds for systems Plastimatch does not have binaries for
pyplastimatch
Python wrapper for Plastimatch.
MultiVolumeImporter
A 3D Slicer module to support import of multi-volume data from non-DICOM sources, and provide plugin for importing such data from images saved in DICOM.
ProjectWeek
Website for NA-MIC Project Weeks
itkwidgets
Interactive Jupyter widgets to visualize images, point sets, and meshes in 2D and 3D
fedorov.github.io
personal web site
open-data-registry
A registry of publicly available datasets on AWS
SlicerDICOMwebBrowser
3D Slicer extension for browsing and downloading medical imaging collections from DICOMweb databases