Andrey Fedorov's repositories
MultiVolumeImporter
A 3D Slicer module to support import of multi-volume data from non-DICOM sources, and provide plugin for importing such data from images saved in DICOM.
ChangeTrackerPy
Migration of ChangeTracker module from C++/Tcl Slicer3 to C++?/Python Slicer4
ExtensionsIndex
Slicer extensions index
ProjectWeek
Website for NA-MIC Project Weeks
QuantitativeReporting
3D Slicer module for creating template-based annotation+markup imaging reports.
SlicerTotalSegmentator
Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model
fedorov.github.io
personal web site
IDC-WebApp
Web Application front end for IDC
itkwidgets
Interactive Jupyter widgets to visualize images, point sets, and meshes in 2D and 3D
kaapana
Kaapana (from the hawaiian word kaʻāpana, meaning “distributor” or “part”) is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios with a focus on radiological and radiotherapeutic imaging.
mhub-models
Stores the MHub models dockerfiles and scripts.
open-data-registry
A registry of publicly available datasets on AWS
plastimatch_builds
Builds for systems Plastimatch does not have binaries for
prostate_mri_us_biopsy_dcm_conversion
Examples for converting prostate MRI-US-Biopsy STL prostate and lesion surfaces to DICOM SEG and DICOM STL.
pyplastimatch
Python wrapper for Plastimatch.
SlicerDICOMwebBrowser
3D Slicer extension for browsing and downloading medical imaging collections from DICOMweb databases
SlicerIDCBrowser
A 3D Slicer extension to support access to the content of NCI Imaging Data Commons
TotalSegmentator
Tool for robust segmentation of >100 important anatomical structures in CT images