dnbaker

BlazeIterative

caffe-stochastic-depth

Caffe: a fast open framework for deep learning.

cuckoofilter

cybmf

Old Utilities from BMFtools development

debgr

deBGR: An Efficient and Near-Exact Representation of the Weighted de Bruijn Graph

dlib

(Old) Shared utilities between C/C++ projects for HTSlib

FizzBuzzEnterpriseEdition

FizzBuzz Enterprise Edition is a no-nonsense implementation of FizzBuzz made by serious businessmen for serious business purposes.

gemmlowp

Low-precision matrix multiplication

hmmer

Profile hidden Markov models for biological sequence analysis

InsertSize

kraken

Kraken taxonomic sequence classification system

LabWebsite

The Marthlab Website

lbimproved

Dynamic Time Warping (DTW) library implementing lower bounds (LB_Keogh, LB_Improved...)

libxsmm

Library targeting Intel Architecture for small, dense or sparse matrix multiplications, and small convolutions.

maskripper

Simple utility for trimming masked ends of aligned reads

parallel-trpo

A parallel version of Trust Region Policy Optimization

pdqsort

Pattern-defeating quicksort.

radix

Radix sort implemented i Java and C/C++ with benchmark.

samtools

Tools (written in C using htslib) for manipulating next-generation sequencing data

StronglyUniversalStringHashing

Benchmark showing the we can randomly hash strings very quickly with good universality

taxonomer_0.5

full taxonomer cython repository

Trilinos

Primary repository for the Trilinos Project

trimadap

Fast but inaccurate adapter trimmer for Illumina reads