dnbaker

stochasticSVM

SVM trained by the PEGASOS Stochastic Subgradient Descent algorithm

valptr

Stores a pointer and a value using unused bits in the pointer

fftwrapper

RAII-based C++ wrapper of FFTW

gds

Graph Data Structures: Generic, Space-efficient Graph Algorithms

clhash

C library implementing the ridiculously fast CLHash hashing function

Stream-Data-Compactor

Burrows-Wheeler Transform for Data Compression

sv

Sparse Vector Implementation

attention-is-all-you-need-pytorch

A PyTorch implementation of the Transformer model in "Attention is All You Need".

bamcov

Quickly calculate and visualize sequence coverage in alignment files

BlockTrees

BMFtools

Barcoded Molecular Families

branchless-utf8

Branchless UTF-8 decoder

cqf

A General-Purpose Counting Filter: Counting Quotient Filter

dbt

dlib

(Old) Shared utilities between C/C++ projects for HTSlib

dnlp

A hodgepodge of NLP-related code.

fastrange

A fast alternative to the modulo reduction

gcc

kf

Short Kmer Frequencies in a single pass

libpopcnt

🚀 Fast C/C++ bit population count library

lineQC

MMSplice

openfst-wrapper

openssl

TLS/SSL and crypto library

scribe-notes

Scribe notes taken during class

sdsl-vec-test

Benchmarking SDSL compressed integer vector access speed and compression ratio

SuRF

tessil.github.io

tree-test

Evaluating the performance of RB- and AVL-tree

trie

I can not win but I haz 2 ...