dnbaker

svox2

Plenoxels: Radiance Fields without Neural Networks

pbrt-v4

Source code to pbrt, the ray tracer described in the forthcoming 4th edition of the "Physically Based Rendering: From Theory to Implementation" book.

openfold

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

MAE-pytorch

Unofficial PyTorch implementation of Masked Autoencoders Are Scalable Vision Learners

consistencydecoder

Consistency Distilled Diff VAE

koila

Prevent PyTorch's `CUDA error: out of memory` in just 1 line of code.

TEASER-plusplus

A fast and robust point cloud registration library

Swin-Unet

[ECCVW 2022] The codes for the work "Swin-Unet: Unet-like Pure Transformer for Medical Image Segmentation"

DirectVoxGO

Direct voxel grid optimization for fast radiance field reconstruction.

PaLM-pytorch

Implementation of the specific Transformer architecture from PaLM - Scaling Language Modeling with Pathways

pipes

Pipelines for expressive code on collections in C++

wise-ft

Robust fine-tuning of zero-shot models

Clair3

Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

netrd

A library for network {reconstruction, distances, dynamics}

echtvar

using all the bits for echt rapid variant annotation and filtering

SISH

Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering

Equivariant-SFM

gateloop-transformer

Implementation of GateLoop Transformer in Pytorch and Jax

esgd

ESGD-M is a stochastic non-convex second order optimizer, suitable for training deep learning models, for PyTorch.

BALNMP

Predicting Axillary Lymph Node Metastasis in Early Breast Cancer Using Deep Learning on Primary Tumor Biopsy Slides, BCNB Dataset

lphash

Fast and compact locality-preserving minimal perfect hashing for k-mer sets.

Protein-Localization-Transformer

Code for CELL-E: Biological Zero-Shot Text-to-Image Synthesis for Protein Localization Prediction

dynamap

A framework which is capable of mapping rigid and non-rigid scenes and localize camera in the environment at the same time

tysserand

Fast reconstruction of spatial networks from bioimages.

Movi

Fast and cache-efficient full-text pangenome index

GOAT

Official Code Repository for the paper "Graph Ordering Attention Networks"

DrugLinker

Simple exact-matching algorithm to standardise drug names appearing on the DrugBank open-access repository

libhmmer-sys

A thin rust wrapper around libhmmer

Markonv_figures

Markonv: a novel convolutional layer for identifying inter-positional correlations effectively and efficiently This is the repository for reproducing figures and tables in the paper.

pacsketch

Network Anomaly Detection Using Probabilistic Data Structures