Daniel Baker (dnbaker)

dnbaker

Geek Repo

Company:@langmead-lab

Location:Baltimore, MD

Twitter:@dnb_hopkins

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Daniel Baker's repositories

frp

FRP: Fast Random Projections

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mcl

Markov Clustering

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khset

Simple wrappers around khset/map

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CircularQueue

Circular Queue for minimizing memory allocations in deque applications

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DCI

Dynamic Continuous Indexing

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kspp

C++/RAII port of kstring_t from klib

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diskmat

mmap-backed blaze matrices

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lazy

Lazy container for reduced memory footprint and optional initialization

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blaze-rnla

Randomized Linear Algebra for blaze-lib

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blaze_tensor

3D Tensors for Blaze (https://bitbucket.org/blaze-lib/blaze)

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cpp-btree

Modern C++ B-tree containers

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kraken2

The second version of the Kraken taxonomic sequence classification system

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linear

Linear containers for accelerated small sets/counters

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MMseqs2

MMseqs2: ultra fast and sensitive search and clustering suite

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network_simplex

Fast optimal transport code

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paryfor

parallel_for based on atomic queues and C++11 threads

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project_templates

Templates for C++ projects using the sketch library

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psitools

PSI tools

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rails

Ruby on Rails

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rax

A radix tree implementation in ANSI C

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RcppBlaze3

Rcpp Integration for the Blaze High-Performance C++ Math Library

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reedsolomon

A pure-python Reed Solomon encoder/decoder

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reservoir

Reservoir sampling from Data frOm Gigantic Streams

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skip_list

STL-style C++ skip_list container

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sleef

SIMD Library for Evaluating Elementary Functions, vectorized libm and DFT

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timestamper

Track subprogram runtimes

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ZipIterator

Variadic reference-based implementation of a zip iterator in C++(>=17)

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