Cytoscape Consortium's repositories
cytoscape.js-tutorial-demo
Out of date. Refer to https://blog.js.cytoscape.org/tutorials/
cytoscape.js-tutorials
Cytoscape.js tutorials project for GSOC 2016
js-graph-lib-comparison
A comparison of JS graph libs
cytoscape.js-hierarchical
A Cytoscape.js extension for the hierarchical clustering algorithm
jupyter-cytoscape
Cytoscape.js API support in JS, Python, and R Jupyter kernels
slush-cytoscape-extension
A Cytoscape.js extension generator
cytoscape.js-k-means
A Cytoscape.js extension for the k-means, k-medoids, & fuzzy c-means family of algorithms
cytoscape.js-arbor
The Arbor physics simulation layout for Cytoscape.js
cytoscape.js-markov-cluster
A Cytoscape.js extension for the Markov cluster algorithm
cytoscape.js-reveal-slides
Reveal.js for presentation "Displaying interactive networks on the web"
mozfest2015-session
A starting point for building graphs with Cytoscape.js during the MozFest 2015 open science session
r2cytoscape
R functions for Cytoscape automation
cytoscape.js-demos
User-submitted demos of Cytoscape.js
cytosnap-demo
A demo Cytosnap server
cyjs-export-simple
Template code for simple export from Cytoscape 3.2.
cytoscape.js-affinity-propagation
A Cytoscape.js extension for the affinity propagation algorithm
cytoscape.js-rpc
Use JSON-RPC to drive a remote instance of Cytoscape.js
generator-cytoscape-extension
A Cytoscape.js extension generator
Javascript-Voronoi
A Javascript implementation of Fortune's algorithm to compute Voronoi cells
cytoscape-headless-distribution
Cytoscape 3 headless (command-line) version. This distribution is still experimental.
cxio_examples
Examples on how to create new aspects.
cytoscape-tests
Repository for testing materials and procedures for Cytoscape Core and Core Apps
cytoscape.js-fisheye
Fisheye view functionality for Cytoscape.js
homebrew-science
Scientific formulae for the Homebrew package manager